Welcome to scdemon’s documentation!

Contents:

• Usage
  • Installation
• Basic example
• API
  • Modules
  • Graph
  • Plotting

scdemon (single-cell decomposition into module networks) is a method for discovering gene co-expression modules in single-cell datasets.

Check out the Usage section for further information, including how to install the project.

The Basic example outlines a simple example for module detection on a toy dataset.

Note

This project is under active development.